Attribute | Value | % of total |
---|---|---|
Genome size (bp) | 4,060,520 | 100.00% |
DNA coding region (bp) | 3,661,597 | 90.18% |
DNA G+C content (bp) | 2,212,212 | 54.48% |
Number of scaffolds | 17 | Â |
Extrachromosomal elements | unknown | Â |
Total genes | 3,739 | 100.00% |
RNA genes | 80 | 2.14% |
rRNA operons | unknown | Â |
tRNA genes | 56 | 1.50% |
Protein-coding genes | 3,659 | 97.86% |
Pseudo genes | 0 | 0.00% |
Genes with function prediction (proteins) | 3,256 | 87.08% |
Genes in paralog clusters | 2,856 | 76.38% |
Genes assigned to COGs | 3,175 | 84.92% |
Genes assigned Pfam domains | 3,303 | 88.34% |
Genes with signal peptides | 313 | 8.37% |
Genes with transmembrane helices | 941 | 25.17% |
CRISPR repeats | 1 | Â |