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Table 5. Number of genes associated with the 25 general COG functional categories

From: Genome sequence and description of Nesterenkonia massiliensis sp. nov. strain NP1T

Code

Value

%agea

Description

J

149

5,60

Translation

A

1

0,04

RNA processing and modification

K

162

6,08

Transcription

L

188

7,06

Replication, recombination and repair

B

1

0,04

Chromatin structure and dynamics

D

20

0,75

Cell cycle control, mitosis and meiosis

Y

0

0

Nuclear structure

V

36

1,35

Defense mechanisms

T

78

2,93

Signal transduction mechanisms

M

112

4,21

Cell wall/membrane biogenesis

N

3

0,11

Cell motility

Z

0

0

Cytoskeleton

W

0

0

Extracellular structures

U

29

1,09

Intracellular trafficking and secretion

O

71

2,67

Posttranslational modification, protein turnover, chaperones

C

129

4,84

Energy production and conversion

G

148

5,56

Carbohydrate transport and metabolism

E

239

8,97

Amino acid transport and metabolism

F

67

2,52

Nucleotide transport and metabolism

H

88

3,30

Coenzyme transport and metabolism

I

73

2,74

Lipid transport and metabolism

P

160

6,01

Inorganic ion transport and metabolism

Q

48

1,80

Secondary metabolites biosynthesis, transport and catabolism

R

293

11,00

General function prediction only

S

142

5,33

Function unknown

_

713

26,77

Not in COGs

  1. aThe total is based on the total number of protein coding genes in the annotated genome