Table 3. Nucleotide content and gene count levels of the genome
From: Draft genome sequence of Dyadobacter tibetensis type strain (Y620-1) isolated from glacial ice
Attribute | Value | % of totala |
|---|---|---|
Genome size (bp) | 5,313,963 | 100 |
DNA coding region (bp) | 4,680,447 | 88.08 |
DNA G+C content (bp) | 2,308,448 | 43.44 |
Total genes | 4,867 | 100 |
RNA genes | 39 | 0.80 |
Protein-coding genes | 4,828 | 82.68 |
Genes with function prediction | 2,844 | 58.91 |
Genes assigned to COGs | 2,208 | 70.55 |
Genes assigned to Pfam domains | 3299 | 68.33 |
Genes assigned to TIGRfam domains | 2161 | 44.76 |
Genes with signal peptides | 372 | 7.71 |
Genes with transmembrane helices | 628 | 13.01 |
CRISPR repeats | 1 |