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Table 1. Classification and general features of D. retbaense strain HR100T in accordance with the MIGS recommendations [11]

From: Complete genome sequence of Desulfohalobium retbaense type strain (HR100T)

MIGS ID

Property

Term

Evidence code

 

Current classification

Domain Bacteria

TAS [12]

 

Phylum Proteobacteria

TAS [13]

 

Class Deltaproteobacteria

TAS [14,15]

 

Order Desulfovibrionales

TAS [14]

 

Family Desulfohalobiaceae

TAS [14]

 

Genus Desulfohalobium

TAS [1]

 

Species Desulfohalobium retbaense

TAS [1]

 

Type strain HR100

TAS [1]

 

Gram stain

negative

TAS [1]

 

Cell shape

rod with rounded ends

TAS [1]

 

Motility

motile (one or two polar flagella)

TAS [1]

 

Sporulation

nonsporulating

TAS [1]

 

Temperature range

25–43°C

TAS [1]

 

Optimum temperature

37–40°C

TAS [1]

 

Salinity

>0–240 g/l (optimum 100 g/l)

TAS [1]

MIGS-22

Oxygen requirement

obligate anaerobic

TAS [1]

 

Carbon source

acetate, biotrypcase, yeast extract

TAS [1]

 

Energy source

H2, formate, lactate, ethanol, pyruvate

TAS [1]

MIGS-6

Habitat

hypersaline sediments

TAS [1]

MIGS-15

Biotic relationship

free living

NAS

MIGS-14

Pathogenicity

none

TAS [16]

 

Biosafety level

1

TAS [16]

 

Isolation

surface sediment

TAS [1]

MIGS-4

Geographic location

Retba Lake, Senegal

TAS [1]

MIGS-5

Sample collection time

1989

NAS

MIGS-4.1

Latitude, Longitude

14.84, −17.23

NAS

MIGS-4.2

   

MIGS-4.3

Depth

not reported

 

MIGS-4.4

Altitude

−4 m

TAS [1]

  1. Evidence codes - IDA: Inferred from Direct Assay (first time in publication); TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [17]. If the evidence code is IDA, then the property was directly observed for a live isolate by one of the authors or an expert mentioned in the acknowledgments.