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Table 1. Classification and general features of Oscillibacter valericigenes Sjm18-20T

From: Complete genome sequence of Oscillibacter valericigenes Sjm18–20T (=NBRC 101213T)

MIGS ID

Property

Term

Evidence codea

 

Current classification

Domain Bacteria

TAS [9]

 

Phylum Firmicutes

TAS [1012]

 

Class Clostridia

TAS [13,14]

 

Order Clostridiales

TAS [15,16]

 

Family Oscillospiraceae

NAS [15,17]

 

Genus Oscillibacter

TAS [18]

 

Species Oscillibacter valericigenes

TAS [1]

 

Type strain Sjm18-20

TAS [1]

 

Gram stain

negative

TAS [1]

 

Cell shape

straight or slightly curved rods

TAS [1]

 

Motility

oscillatory motility by peritrichous flagella

TAS [1]

 

Sporulation

non-sporulating

TAS [1]

 

Temperature range

15–35°C

TAS [1]

 

Optimum temperature

30°C

TAS [1]

 

Carbon source

yeast extract, polypeptone

TAS [1]

 

Energy source

heterotrophic

TAS [1]

 

Terminal electron receptor

  

MIGS-6

Habitat

alimentary canal of Japanese corbicula clam (Corbicula japonica)

TAS [1]

MIGS-6.3

Salinity

0–4% NaCl (no growth in 6%)

TAS [1]

MIGS-22

Oxygen

strictly anaerobic

TAS [1]

MIGS-15

Biotic relationship

free-living

NAS

MIGS-14

Pathogenicity

none

NAS

MIGS-4

Geographic location

sea coast in Shimane Pref., Japan

TAS [1]

MIGS-5

Sample collection time

November 10, 2004

NAS

MIGS-4.1

Latitude

NAS

 

MIGS-4.2

Longitude

NAS

 

MIGS-4.3

Depth

NAS

 

MIGS-4.4

Altitude

NAS

 
  1. a) Evidence codes - TAS: Traceable Author Statement (i.e., a direct report exists in the literature); NAS: Non-traceable Author Statement (i.e., not directly observed for the living, isolated sample, but based on a generally accepted property for the species, or anecdotal evidence). These evidence codes are from the Gene Ontology project [19].